[QUOTE=Subway Prophet]
Keeping in mind that a lone island in the middle of the ocean can also be viewed as a collection of materials and processes. The materials aren’t homogenous either - it’s part silica, part coral, part basalt, and so on. What you see above the surface is merely a continuation of the landmass beneath it, which is the result of geological and biological processes, etc. When observed across geologic time, it is seen to grow and change and eventually sink, and probably has “siblings” that go through similar processes at different times.
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ok, now you are just deconstructing my words. 
[QUOTE=Subway Prophet]
I’m sure someone more familiar with quantum physics will come by and correct me, but I understand that yes, individual hydrogen atoms are unique in measurable ways. Ignoring such details as whether they compose a larger mocule, and further ignoring head-numbing topics such as quantum electrodynamics, individual hydrogen atoms can differ at least in terms of electrical charge (ions) and atomic mass (isotopes).
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I don’t think there are enough variations on ions and isotopes (6?) to make ALL hydrogen atoms in the universe unique. Ditto for whatever other variables might be there. Anyone care to take a stab at how many atoms of Hydrogen are out there? This could be a nice example of the vastness of the universe multiplying even the smallest probability.
[QUOTE=Subway Prophet]
As to whether all uniqueness is an artifact of definition - how do you (you, Sapo) define an electron? How do you define a mountain? You can’t, not in the sense that you can define a mathematical set such as Mandelbrot’s, because these things were in place before you. You can, however, observe these things. Given sufficiently high resolution in your tools, I’d wager that you can find uniqueness in observing any natural phenomenon.
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Probably, the trend is the contrary. We make definitions to bundle stuff together more than to take them apart. We have a rough time remembering Blackie, Zeus, Ginger and Lassie and we make up the concept of dog to have just one name for them all. But most certainly, yes, you are right, zoom in enough and most everything is unique (maybe)
There must be a pretty good definition of electron out there, though. One that includes ALL electrons and leaves out all non-electrons (my bad definition of a good definition). Ditto for stars, black holes, water molecules. Is there?
I think some things are really universal enough that if Drake’s 10K civilizations encountered them, they would all have a concept for them. Something so self-evident that its definition is more a description than a creation. A proton or a star are my top choices for obvious examples. Are they?