Smell column - primary reception not so well understood

I’m not a specialist in smell research by any means, but my understanding is that the idea of “smell primaries” hasn’t really had much currency for quite some time now. If you want evidence just look to the gazillion dollars that fragrance and flavour companies spend every year trying to come up with new synthetic odorants – a burden they could be quickly relieved of if we could produce any smell sensation on the basis of just 7 primaries.

I think the honest answer about smell reception at this point in time is that it remains poorly understood. Various “Shapist” (lock-and-key) models are the most widely accepted, but their predictive value has proven to be completely dismal – another thorn in side of the fragrance and flavour R&D budgets.

“Vibrationist” theories have been proposed from time to time, most recently in the form of an inelastic electron tunnelling model devised by the biophysicist Luca Turin. The guys is not well liked in smell research circles, and vibration theory has not been well received, but he has done a terrific job of enumerating all of the many inadequacies of current lock-and-key theories of smell reception.

I guess wikipedia is as good a place to start as any, if you’re curious.

[QUOTE=anosmia]
I think the honest answer about smell reception at this point in time is that it remains poorly understood. Various “Shapist” (lock-and-key) models are the most widely accepted, but their predictive value has proven to be completely dismal – another thorn in side of the fragrance and flavour R&D budgets.

“Vibrationist” theories have been proposed from time to time, most recently in the form of an inelastic electron tunnelling model devised by the biophysicist Luca Turin. The guys is not well liked in smell research circles, and vibration theory has not been well received, but he has done a terrific job of enumerating all of the many inadequacies of current lock-and-key theories of smell reception.
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Interesting. I’m not an expert in olfaction either, but I hadn’t heard the vibration model. There’s an interesting article in Nature neuroscience by Keller and Vosshall published in 2004 that seems to systematically eviscerate the model though. Here are the major findings–

[QUOTE=Vosshall and Keller 2004]
Turin predicts that the smell of a mixture of guaiacol and benzaldehyde has a vanilla character not found in its components because the combined molecular vibrations of benzaldehyde and guaiacol approximate the vibrations of vanillin.

At neither concentration did the mixture of benzaldehyde and guaiacol have a stronger vanilla character than that of its individual components. A similar result was obtained when odor pairs were rated on an odor similarity rating scale (Supplementary Fig. 1 online, panel b).

A second prediction of vibration theory as proposed by Turin is that aldehydes with an even number of carbon atoms have a different odor than those with an odd number.

Contrary to Turin’s prediction, pairs consisting of two odd or two even numbered aldehydes were not perceived as more similar than pairs consisting of an odd and an even numbered aldehyde (Fig. 1c). We found instead, as suggested in previous studies, that the carbon chain length of these molecules is the salient feature sensed by the olfactory system.

A third prediction of Turin’s vibration theory is that acetophenone (AP) and completely deuterated acetophenone (AP-d8), which have the same shape but different molecular vibrations, should have distinguishable smells.

Subjects easily distinguished the enantiomers but could not distinguish AP from AP-d8 (Fig. 2b). Finally, we used a duo-trio test in which two stimuli were presented and the subject was asked to identify the one identical to a third reference smell. In a separate session, we tested six subjects who had successfully distinguished AP from AP-d8 to determine whether their correct selections reflected chance performance or true discrimination of these two odorants. None of the six subjects was able to distinguish the two smells. The proportion of correct choices ranged from 43% to 67% (mean, 53%; standard error plusminus 14%; Fig. 2c).

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I find this article pretty convincing at first glance. I think the vibrational model is cool, but it kind of defies the way signal transduction appears to work in any other sensory modality. As far as I can tell, the lock-and-key model is a better (though certainly imperfect) model. The fact is, structural biology is hard, and I suspect we simply don’t know enough about odorant receptors to design molecules well against them at this point.

I could be wrong.

Agreed that any lock-and-key model with any predictive value is going to have to be monstrously complicated, and is just beyond our capability right now.

My main issue with the tiny Keller and Vosshall study is that they used naive subjects that weren’t screened for their smelling acuity. We already know that there’s huge variation in natural acuity (i.e. many chefs and perfumers are absolute freaks compared to the rest of us, esp. after years of training), and Turin himself never claimed that the key differences in odorant character are massive. The previous animal studies using isotopes seemed to suggest that acuity might play a very important role in whether we find experimental support for vibration theory.

As an aside, I seem to remember Turin raising one point in his book that I found particularly interesting – namely, seeing as how receptor antagonists seem to be so common, how come an obvious one has never been encountered for smell reception? (E.g. A molecule that, when sniffed, prevents us from smelling a specific odorant.)

In any case, I don’t really want to be an apologist for vibration theory. My main issue with the staff report was in regards to the notion of smell primaries, as well as primary and secondary odorants, which to my knowledge enjoy very little evidence or support.

[QUOTE=anosmia]
As an aside, I seem to remember Turin raising one point in his book that I found particularly interesting – namely, seeing as how receptor antagonists seem to be so common, how come an obvious one has never been encountered for smell reception? (E.g. A molecule that, when sniffed, prevents us from smelling a specific odorant.)
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Again, I’m not in this field–I’m not even in pharmacology–but a quick PubMed search turned up some stuff that suggests that selective antagonism of olfactory receptors does occur.

Just abstracts this time (I still have a stack of papers to read for my real research, ugh)…


[QUOTE=Oka et al. 2004]
Despite increasing information on agonist-OR combinations, little is known about the antagonism of ORs in the mammalian olfactory system. Here we show that odorants inhibit odorant responses of OR(s), evidence of antagonism between odorants at the receptor level. The antagonism was demonstrated in a heterologous OR-expression system and in single olfactory neurons that expressed a given OR, and was also visualized at the level of the olfactory epithelium. Dual functions of odorants as an agonist and an antagonist to ORs indicate a new aspect in the receptor code determination for odorant mixtures that often give rise to novel perceptual qualities that are not present in each component. The current study also provides insight into strategies to modulate perceived odorant quality.
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[QUOTE=Firestein 2004]
Recent research adds a layer of complexity to the interpretation of this olfactory code, suggesting that the overall effect of a mixture of odorants is not simply equal to the sum of its parts. Rather, individual odorants can act as antagonists at the level of individual GPCRs, thereby suppressing some of the signaling pathways activated by structurally related compounds. Thus, the odor code not only is a function of the pattern of activated receptors, but also may be further sharpened by the action of antagonism. It seems that odor coding is now a division of pharmacology.
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Again, I suspect that part of the issue here is the sheer complexity of the olfactory system in terms of receptor diversity. I might not expect there to be a blanket olfactory receptor antagonist, given how many olfactory receptors exist. And, as these abstracts indicate, odorants themselves may act as agonists at some receptors and antagonists at others, meaning that the perceived odor of a given mixture of volatile compounds is a complex odor code derived from a great deal of interference between competing odorants. As a result, maybe we have identified odorant antagonists :wink:

Oh no worries. I’m glad you exposed me to it; as I said, I’d not heard of it. Olfaction is sort of the least popular sensory modality in terms of neuroscientific investigation, and I think it’s due for a closer look. God knows I’m sick of hearing about visual cortex…

Link to column.

I enjoyed that article, well written Fierra.

I’ve seen Luca Turin speak and he gives a fantastic lecture. I suspect his vibrational theory would be better received coming from someone else - he has the type of salesman charisma that makes scientists nervous. Anyway, he uses some knockout examples that are covered in the wiki article anosmia linked to. The borane one in particular was memorable, he searched the literature for a compound that had the same vibrational stretch as a S-H bond, not many do as it is a relatively empty region of the spectrum, and came up with a borane, a million miles away in structure from a thiol. Hey presto, the borane smells sulfurous.

The lock and key terminology seems a little unfortunate to me. It’s a very classical metaphor to be applying to an area as poorly understood as olfaction.

[QUOTE=nameless]
I might not expect there to be a blanket olfactory receptor antagonist, given how many olfactory receptors exist.
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I guess we should give up on the dream of an aerosol can full of doo-doo antagonist. Back to lighting matches . . .