Oh, come on, Tracer! Just about EVERYTHING is the result of a particle or two… radiation is nothing more than hurtling particles (the smaller the particle, the more dangerous the radiation), light is a bunch of photons… etc. As Dark Helmet once said… “What’s with you man? Come ON!” Particle shields are designed to stop “macro” objects, while ray shields are designed to stop “micro” objects.
C’mon, guys, don’t judge something by what it’s named, judge it by what it does. If we were arguing based on names, then photon torpedoes would be nothing more than projectile sunburn makers.
Two things would prevent them from detecting a microjump… first, and simplest, it’d be practically instantaneous. Second, our good Star Trek buddies have no knowledge of hyperspace existing. While an object is in hyperspace, other objects outside have no means of detecting it. There’s no physics to back this up (hyperspace, along with subspace, are fictional tools to allow story), only brief mentions from numerous books (I believe it was in The Last Command where someone mentioned that a well-timed assault would have to be planned before jumping to hyperspace since there’s no hyperspace-realspace communication, but I’ll go through some of the novels and dig the exact reference… no time to do it now, though, it’d take hours).
I’ll tell you where… any Federation ship completely loses hull integrity when it’s structural integrity field collapses. Basically, it’s got an energy field that holds the thing together. All those high-speed maneuvers (relatively) and such would tear the ship to shreds without the inegrity field.
Also, simple “eye-ball measurements”. The battle section (with the nacelles and such) is connected to the saucer section by a REALLY thin structure… that “neck” thingy can’t be more than several dozen meters thick. Compared to how massive the saucer section is and the rest of the battle section is, that’s a really weak spot right there. Should a single turbolaser blast or two penetrate the shields and hit anywhere along that weak spot, there’s gonna be trouble.
Now, to address Soulsling’s shielding issue… I sincerely doubt that a transporter beam would be capable of penetrating the ISD’s ray shields (particle shields would do nothing, of course). There’s absolutely no mention in any novel or sourcebook that I’ve read of SW shields operating on a frequency basis… while I hate to dispel an idea based on lack of evidence, this whole argument doesn’t really have a firm basis in real-life facts, does it? 
Before anyone berates me for “being biased” or “remaining ignorant” or “poo-pooing”, or whatever, let me explain: In an argument like this, it’s very easy to say “ST’s weapons and shields are far stronger than SW’s, and a phaser would slice through the Star Destroyer like a hot knife through butter”, and vice versa, without any shred of evidence since it’s all, of course, make-believe. I want to avoid that, which led to two required assumptions: 1. The two ships’ weapons and shield technologies have to be assumed to be relatively comparable in terms of strength (no exactly equal, but closer than a spitwad vs. a nuke), and 2. We have to go by what “official” sources say (TV, movies, novels, sourcebooks, etc.), and if something isn’t mentioned or implied, we either have to assume that it’s negligible/nonexistent/whatever. You can disagree with me if you want, that’s cool, but if you do, PLEASE offer another solution, just so we’re all batting in the same field, okay? Thanks!
Oh, man, ANOTHER long post… seems the longer this thread gets (it’s my baby, and I plan to add it to my sig, just like Esprix did with his Ask The Gay Guy bit), the longer my posts seem to get. Or maybe it’s just the longer I’m with the Straight Dope…? ::shrug:: And I didn’t even continue with my ideas about plasma conduits… oh well, I’ll let someone else think on that one.