Genes and Chromosomes

Is this how genes and chromosomes work?

  1. Genes are sort of like computer bits, except they can take on 4 different states rather than just 2. A gene is made by attaching a molecular group to the backbone of a DNA molecule. Essentially by dictating protein formation, a gene, or perhaps a small combination of genes, confers a trait on the individual. Mutations effect genes, either one at a time or perhaps in groups.

  2. Chromosomes are DNA molecules, and so carry thousands of genes. You have 46 of them, and all 46 have names or labels (the X and Y chromosomes are examples). Each of the 46, say number 15 (or whatever it’s called), is a replica of either your mother’s #15 or your father’s #15. So, traits dictated by genes on the same chromosome are inherited together, and you either get your mother’s dimples and short pinkies, or your father’s, but you never inherit traits on a common chromosome from different parents.

Have I got it? Or can someone correct me? Thanks!

Not quite that simple. To start, you left out the possibility of mutation.

Well, just because genes are on the same chromosome doesn’t mean you’ll end up getting exactly the same chromosome #15 as your mom or your dad, to use your example. In meiosis, which happens in the germ cells (testes and ovaries), chromosomes line up and swap bits to produce a new variety of gene combinations. So your mom’s two #15’s, one from her mom and one from her dad, line up and exchange genes here and there. Through this process, each of her eggs has a slightly different chromosome #15 to pass on.

Saying that “you never inherit traits on a common chromosome from different parents” is sort of true, in that you will have two copies of each chromosome, one from each parent, and those two won’t mix up at all until your germ cells start dividing to make gametes of their own. But the genes on both copies of the chromosome will be expressed independently. If the trait “Dimples” is recessive and Dad has no dimples, then even if you inherited the gene for dimples from your mom, you won’t express it since your dad’s dominant gene is masking it. So you’re right in terms of genotype (the actual genes inherited) but not necessarily in terms of phenotype (the visible trait from that gene).

About your genes = computer bits, you’re sort of on the right track. A gene is a stretch of DNA, and is basically a long line of A’s, T’s C’s and G’s. Those are nucleotides, and they are the “bits” of the system. Basically, that string is copied and read, with each set of 3 letters corresponding to a specific amino acid, which are the subunits of proteins. The cell reads the code in the DNA and hooks up amino acids in the order it’s told to in order to make the protein.

How does that lead to a trait? Some links are more obvious than others. For example, sickle cell anemia is caused by a mutation in the hemoglobin gene - the mutation means that the code gets read with an error and a wrong amino acid is put in, changing the function of the protein. It doesn’t hold its shape well and red blood cells sickle. Many traits, though, are under the control of several interacting genes, and the genes also interact with the environment. Height, for example. Even if your parents are giants, without good nutrition, your tall genes can’t function as they’re supposed to because they have nothing to work with.

Hope this helps a bit…

You are confusing nucleotides (commonly referred to as A,T,C, and G) with genes in that statement. Genes are made up of nucleotide sequences, so it isn’t correct to say that genes can take on 4 different states. It’s the nucleotides that come in four different “flavors” or molecules.

Not exactly. The phosphate ‘backbone’ is added last. Each subunit of a DNA molecule is made up of three parts: a base (A, G, T or C), a sugar (deoxyribose), and a phosphate group. (All of this is easier to explain with pictures; I’ll leave it to you to search for some, as there are many sites that explain DNA structure and replication.) The base and the sugar together are called a nucleoside; a nucleoside with a phosphate group (at the 5’ position) is a nucleotide. (The nucleosides are built first, then the phosphate groups are added.) When DNA is copied, the two strands are pulled apart, and each single strand is copied by adding nucleotides to a growing chain. This can be done because the bases are complementary; that is, A only pairs with T and C with G. So, when a strand is being copied, the appropriate nucleotide comes in and binds first with the complementary base. Then, its phosphate group is bonded to the 3’ position of the growing strand.

When properly processed, each gene will yield one protein, but there is much more to a gene than the sequence of letters that tell the ribosomes which amino acids to use in building the protein. (As has been said, 3 ‘letters’ of DNA – a codon – corresponds with one amino acid in a protein. This is because there are only four possible bases in DNA, but 20 possible amino acids in proteins.) Genes contain several types of other information:

  • codes that allow the enzymes that make RNA copies of DNA to locate the correct gene
  • codes that indicate to the enzyme that the gene is about to begin
  • codes that indicate the beginning of the gene
  • codes that indicate which amino acid should be added to a growing protein (‘codons’, the most important part of a gene; sections of the gene that are used to indicate the protein sequence are collectively called ‘exons’)
  • codes that indicate the end of the gene and tell the enzyme to stop copying (‘stop codons’)
  • long sections of ‘junk DNA’ (introns) that are not part of the protein sequence

After an RNA copy of the DNA is made (transcription), the resulting ‘messenger RNA’ is modified by removing the sections that won’t form part of the protein and by adding and removing some other sections. Then the messenger RNA is delivered to a ribosome, a complex of RNA and proteins that makes new proteins. The RNA is read, three ‘letters’ at a time, and the appropriate amino acids are strung together (translation). The protein then undergoes some further modification (folding, changing some of the amino acids, cutting off parts, adding metal atoms, etc.) before it is ready for use.

Hopefully that explains a bit better what genes actually are. Mutations generally affect one gene at a time, although some very serious mutations might affect many. Mutations might change one base into another (which changes one amino acid in the protein sequence, which can make the difference between a diabetic and a non-diabetic). Or they might add or subtract a base from the sequence, resulting in a change to every amino acid in the sequence after the mutation (resulting in a totally different and probably non-functional protein). Sometimes either of these changes causes also premature or delayed termination of the protein.

One more thing I want to add, because I often thought about it and didn’t learn the answer until very late in the process of studying this kind of thing. The really crucial difference between DNA and RNA is that there is a quick, easy way for RNA molecules to break down chemically (into nucleotides), while there is no easy way for DNA to break down. Thus, RNA is used in applications where the genetic information is used briefly and then recycled, while DNA is used to store genetic information throughout an organism’s lifetime.

Well, that explains why I didn’t know. It sounds 10x more complicated than I thought it was. Thanks for all the detailed info! Very remarkable!